A Shiny app to perform for accurate estimation of vaccine induced cellular immunogenicity with bivariate linear modeling. Available at https://shiny-vici.apps.math.cnrs.fr/, or locally through the
vici R package.
An R package to perform Differential Expression Analysis for RNA-seq data through a robust variance component test. Development version available on GitHub.
An R package to perform Dirichlet process mixture of multivariate normal, skew-normal or skew $t$-distributions modeling oriented towards flow-cytometry data preprocessing applications, using C++ code to speed up computations. Available on CRAN, development version on GitHub.
PheVis an automatic instant phenotyping from EHR data at the visit resolution
An R package to perform automatic instant phenotype prediction at the visit level from EHR data that can be used for either chronic or acute conditions. Development version available on gitlab.
An R package to perform gene set analysis of longitudinal RNA-seq data with variance component score test, accounting for data heteroscedasticity through precision weights. Available on CRAN, development version on GitHub.